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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
Assay category
46
DNA binding
Target of assay
86
histone
86
histone modification
46
narrow histone mark
40
broad histone mark
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
11
September, 2018
8
August, 2017
8
October, 2019
7
December, 2017
4
November, 2019
2
August, 2021
2
June, 2019
2
November, 2017
1
May, 2019
1
May, 2021
Available data
46
bam
46
bed narrowPeak
46
bigWig
28
fastq
15
bigBed narrowPeak
3
tagAlign
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
46
Homo sapiens
Biosample type
34
primary cell
8
in vitro differentiated cells
4
cell line
Organ
107
brain
63
pancreas
46
epithelium
41
liver
39
heart
25
vasculature
24
blood vessel
17
connective tissue
15
kidney
13
limb
8
nerve
7
embryo
6
artery
5
musculature of body
5
vein
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
46
AMP
T1D
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
46
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
Audit category:
11
missing controlled_by
Audit category:
5
inconsistent control read length
award.project!
T1D
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
7
endothelial cell of umbilical vein
5
epithelial cell of proximal tubule
4
pancreatic acinar cell
4
pancreatic alpha cell
4
+ See 6 more…
in vitro differentiated cells
hepatocyte
5
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
4
See all biosamples
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