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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 257accessible chromatin
  • 111target gene predictions
  • 38candidate regulatory elements
  • 9gene expression
  • 6binding sites
  • 2caQTL
Date released
  • 333November, 2021
  • 38May, 2024
  • 25February, 2024
  • 12July, 2025
  • 7August, 2021
  • 6May, 2022
  • 2October, 2022
Available data
  • 402bed bed3+
  • 243bigWig
  • 12bed bed3
  • 12bed narrowPeak
  • 9tsv
Organism
  • 423Homo sapiens
Collection Tags
  • 349AMP
  • 333T2DKP
  • 37DGA
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 6ENCODE
  • 3T1D
Biosample type
  • 416primary cell
  • 7tissue
Organ
  • 162epithelium
  • 61connective tissue
  • 31liver
  • 23vasculature
  • 19intestine
  • 18pancreas
  • 17blood vessel
  • 15musculature of body
  • 12heart
  • 10adrenal gland
  • 10kidney
  • 10skin of body
  • 9lung
  • 9stomach
  • 6large intestine
  • 6lymphatic vessel
  • 6mammary gland
  • 4esophagus
  • 4eye
  • 4small intestine
  • 3extraembryonic component
  • 2bronchus
  • 2embryo
  • 2gonad
  • 2ovary
  • 2placenta
  • 2thyroid gland
  • 2uterus
  • 1bone element
  • 1bone marrow
  • 1thymus
Project
  • 333ENCODE
  • 87AMP
  • 3T1D
Genome assembly (visualization)
  • 534hg19
  • 423GRCh38
Encyclopedia version
  • 1Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
  • 1Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
  • 1FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
  • 1Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
  • 1Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
  • 1Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
  • 1Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
  • 1Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
  • 1T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
  • 1Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
  • 1Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
  • 1Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
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BIOSAMPLE
TYPE

423 results

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Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
gene expression
binding sites
caQTL
primary cell
fibroblast1643
endothelial cell1263
pericyte cell992
endothelial cell of hepatic sinusoid646
smooth muscle cell862
tissue
kidney7
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