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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
88
ChIP-seq
87
ATAC-seq
1
Hi-C
1
snATAC-seq
Assay category
98
Transcription
88
DNA accessibility
88
DNA binding
1
3D chromatin structure
Target of assay
88
histone
88
histone modification
44
broad histone mark
44
narrow histone mark
Date released
136
May, 2021
64
August, 2021
45
May, 2020
11
May, 2023
7
August, 2020
5
March, 2020
3
September, 2020
1
July, 2025
1
March, 2019
1
March, 2023
1
October, 2017
Available data
197
bigWig
186
bam
152
bed narrowPeak
99
tsv
84
tagAlign
64
xls
11
fastq
1
bed bed3+
1
bed broadPeak
1
hic
1
tbi
Organism
274
Homo sapiens
Biosample type
191
primary cell
80
tissue
4
cell line
Organ
75
kidney
18
pancreas
14
epithelium
1
musculature of body
Project
186
T1D
78
AMP
10
HPAP
1
ITG
Genome assembly (visualization)
275
GRCh38
215
hg19
Lab
180
Kyle Gaulton, UCSD
75
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
6
AMP-T2D consortium
2
Stephen Parker, UMich
1
Bing Ren, UCSD
1
ITG
Audit category:
8
inconsistent ontology term
award.rfa!
AMP
BIOSAMPLE
ASSAY
275 results
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total RNA-seq
ChIP-seq
ATAC-seq
Hi-C
snATAC-seq
primary cell
monocyte
53
84
pancreatic alpha cell
7
pancreatic beta cell
3
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
tissue
kidney
75
islet of Langerhans
2
2
skeletal muscle tissue
1
cell line
EndoC_BH1
2
2
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