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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 261ChIP-seq
  • 5total RNA-seq
  • 1ATAC-seq
  • 1WGBS
Assay category
  • 261DNA binding
  • 5Transcription
  • 1DNA accessibility
  • 1DNA methylation
Target of assay
  • 245transcription factor
  • 81recombinant protein
  • 47RNA binding protein
  • 18chromatin remodeller
  • 13histone
  • 13histone modification
  • 7broad histone mark
  • 6narrow histone mark
  • 2other context
  • 2other post-translational modification
Date released
  • 217November, 2017
  • 45November, 2018
  • 5January, 2019
  • 1February, 2021
Available data
  • 268bam
  • 267bigWig
  • 267fastq
  • 262bed narrowPeak
  • 261bigBed narrowPeak
  • 44bed broadPeak
  • 44bigBed broadPeak
  • 9tagAlign
  • 5tsv
  • 1bed bed3
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 268Homo sapiens
Biosample type
  • 268cell line
Organ
  • 268liver
Project
  • 268AMP
Genome assembly (visualization)
  • 330hg19
  • 268GRCh38
Lab
  • 268AMP-T2D consortium
Audit category:
  • 1inconsistent replicate
Audit category:
  • 5missing controlled_by
Audit category:
  • 22inconsistent control read length
  • 6inconsistent control run_type
BIOSAMPLE
ASSAY

268 results

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HepG2261511
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