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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
6
total RNA-seq
Assay category
15
DNA binding
6
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
10
February, 2018
9
December, 2017
2
May, 2021
Available data
21
bam
20
bigWig
19
fastq
14
bed narrowPeak
6
tsv
3
bed bed3+
Organism
21
Homo sapiens
Biosample type
21
in vitro differentiated cells
cell line
Organ
567
pancreas
566
connective tissue
424
adipose tissue
263
liver
235
epithelium
217
brain
162
heart
127
vasculature
123
blood vessel
118
kidney
96
limb
66
bone element
64
artery
53
musculature of body
31
nerve
21
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
21
AMP
Genome assembly (visualization)
21
GRCh38
21
hg19
1
hg18
Lab
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
biosample_type!
cell line
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
13
4
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
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