Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
94
total RNA-seq
13
ATAC-seq
Assay category
94
Transcription
13
DNA accessibility
Target of assay
85
histone
histone modification
44
broad histone mark
41
narrow histone mark
Date released
480
February, 2021
207
November, 2017
191
June, 2019
188
May, 2020
164
July, 2018
122
August, 2017
107
May, 2021
79
July, 2019
79
November, 2018
72
August, 2021
49
April, 2018
42
November, 2019
40
September, 2018
35
February, 2023
34
October, 2019
32
December, 2017
30
December, 2018
19
January, 2019
17
October, 2018
12
May, 2023
11
March, 2020
8
October, 2017
7
August, 2020
7
September, 2017
6
November, 2020
5
April, 2019
5
December, 2019
5
May, 2019
5
May, 2024
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
107
bam
94
bigWig
94
tsv
13
bed narrowPeak
Organism
107
Homo sapiens
Biosample type
in vitro differentiated cells
65
primary cell
38
tissue
4
cell line
Organ
40
pancreas
4
epithelium
2
heart
Project
56
AMP
51
T1D
Genome assembly (visualization)
112
hg19
107
GRCh38
Lab
56
AMP-T2D consortium
51
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
biosample_type!
in vitro differentiated cells
organ_slims!
bone element
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
107 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
primary cell
monocyte
51
13
embryonic stem cell
1
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
Download