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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
294
ChIP-seq
Assay category
294
DNA binding
Target of assay
558
histone modification
557
histone
408
transcription factor
294
broad histone mark
263
narrow histone mark
91
RNA binding protein
88
recombinant protein
31
chromatin remodeller
5
other context
5
other post-translational modification
4
control
Date released
47
October, 2019
44
May, 2021
43
May, 2019
37
April, 2019
37
August, 2017
20
May, 2024
19
October, 2018
17
September, 2018
8
June, 2019
7
November, 2017
6
November, 2019
4
December, 2017
4
January, 2019
1
August, 2021
Available data
294
bigWig
289
bed narrowPeak
274
bam
177
bigBed narrowPeak
80
fastq
60
tagAlign
17
bed broadPeak
13
bigBed broadPeak
8
bed bed3+
Organism
290
Homo sapiens
Biosample type
181
tissue
96
primary cell
in vitro differentiated cells
16
cell line
1
stem cell
Organ
69
pancreas
brain
57
heart
41
blood vessel
41
vasculature
34
limb
33
epithelium
21
liver
16
nerve
15
kidney
14
artery
8
musculature of body
5
vein
4
connective tissue
4
spleen
Project
250
AMP
44
T1D
Genome assembly (visualization)
310
hg19
294
GRCh38
Lab
230
AMP-T2D consortium
44
Kyle Gaulton, UCSD
20
Patrick T. Ellinor, Broad
Audit category:
14
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
9
inconsistent control read length
2
inconsistent assembly
biosample_type!
in vitro differentiated cells
organ_slims!
brain
thymus
BIOSAMPLE
ASSAY
294 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
body of pancreas
11
+ See 16 more…
primary cell
monocyte
44
pancreatic endocrine cell
11
pancreatic ductal cell
6
skeletal muscle myoblast
6
endothelial cell of umbilical vein
5
+ See 8 more…
cell line
HepG2
7
EndoC_BH1
6
Panc1
3
stem cell
hESC
1
See all biosamples
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