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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
834
chromatin state
387
accessible chromatin
285
target gene predictions
126
eQTL
92
histone modifications
72
Fine-mapped variants
38
candidate regulatory elements
9
gene expression
7
caQTL
6
binding sites
Date released
804
September, 2022
333
November, 2021
216
February, 2024
102
January, 2022
97
May, 2021
72
March, 2020
67
January, 2020
38
May, 2024
25
February, 2020
12
July, 2025
12
October, 2019
11
February, 2021
11
May, 2020
11
November, 2019
10
August, 2021
9
May, 2019
7
April, 2019
6
February, 2023
6
May, 2022
3
September, 2018
2
November, 2020
2
October, 2022
Available data
910
bed bed3+
829
bed bed9
375
bigWig
106
tsv
31
bigBed bed9
12
bed bed3
12
bed narrowPeak
Organism
1855
Homo sapiens
Collection Tags
798
EpiMap
359
AMP
356
T2DKP
201
T1D
174
4DN
101
T2D
101
eQTLCatalogue
97
BLUEPRINT
96
GTEx
64
DGA
26
FNIH_projects-heart
24
T2DKP
12
FNIH_projects-liver
12
HPAP
6
CMDGA
6
ENCODE
Biosample type
757
primary cell
734
tissue
365
cell line
in vitro differentiated cells
Organ
243
epithelium
151
brain
127
connective tissue
105
kidney
100
musculature of body
95
heart
90
vasculature
80
lung
79
intestine
78
limb
74
blood vessel
74
embryo
61
liver
61
pancreas
58
uterus
53
bodily fluid
51
blood
47
skin of body
43
large intestine
36
extraembryonic component
33
stomach
28
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
nerve
11
skeleton
10
penis
8
lymph node
8
lymphatic vessel
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
mouth
5
vein
4
bronchus
3
breast
3
vagina
2
bone marrow
2
tongue
2
urinary bladder
1
pituitary gland
Project
1520
AMP
333
ENCODE
3
T1D
Genome assembly (visualization)
6615
hg19
1856
GRCh38
4
hg18
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1856 results
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Clear Filters
chromatin state
accessible chromatin
target gene predictions
eQTL
histone modifications
Fine-mapped variants
candidate regulatory elements
gene expression
caQTL
binding sites
primary cell
monocyte
13
3
84
fibroblast
16
4
2
3
macrophage
11
1
7
3
1
endothelial cell
12
6
3
1
pericyte cell
1
9
9
2
+ See 204 more…
tissue
kidney
16
9
heart
21
3
brain
18
1
2
stomach
19
1
lung
16
1
+ See 147 more…
cell line
HeLa-S3
3
51
H1-hESC
1
37
K562
6
16
HFFc6
19
A549
18
+ See 154 more…
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