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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
346
ChIP-seq
Assay category
346
DNA binding
Target of assay
346
transcription factor
112
histone
112
histone modification
88
recombinant protein
64
RNA binding protein
57
narrow histone mark
54
broad histone mark
31
chromatin remodeller
6
control
2
other context
2
other post-translational modification
Date released
201
November, 2017
56
November, 2018
25
December, 2018
22
August, 2017
14
January, 2019
11
December, 2017
7
October, 2019
5
February, 2021
4
May, 2021
1
November, 2019
Available data
346
bam
346
bigWig
341
bed narrowPeak
329
fastq
298
bigBed narrowPeak
32
bed broadPeak
32
bigBed broadPeak
9
tagAlign
6
bed bed3+
Organism
346
Homo sapiens
Biosample type
309
cell line
tissue
37
in vitro differentiated cells
primary cell
Organ
247
liver
51
blood
51
bodily fluid
22
connective tissue
7
kidney
4
artery
4
blood vessel
4
epithelium
4
heart
4
vasculature
3
embryo
2
pancreas
Project
346
AMP
Genome assembly (visualization)
389
hg19
346
GRCh38
Lab
346
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
1
inconsistent control
Audit category:
9
missing controlled_by
Audit category:
23
inconsistent control read length
6
inconsistent control run_type
biosample_type!
primary cell
tissue
organ_slims!
bone element
BIOSAMPLE
ASSAY
346 results
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Clear Filters
ChIP-seq
cell line
HepG2
245
GM12878
51
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
+ See 3 more…
in vitro differentiated cells
adipocyte
22
cardiomyocytes
3
pancreatic endoderm
3
Posterior foregut
2
definitive endodermal cell
2
+ See 3 more…
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