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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
56
total RNA-seq
46
ATAC-seq
5
DNase-seq
1
WGBS
Assay category
61
DNA binding
56
Transcription
51
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
64
February, 2021
39
May, 2019
35
February, 2023
21
October, 2019
6
July, 2019
3
June, 2019
1
March, 2020
Available data
134
bam
126
bigWig
112
bed narrowPeak
62
bigBed narrowPeak
56
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
169
Homo sapiens
Biosample type
105
tissue
64
cell line
primary cell
Organ
534
connective tissue
519
liver
443
pancreas
422
adipose tissue
256
heart
203
brain
177
kidney
169
blood vessel
169
vasculature
126
artery
96
limb
69
epithelium
bone element
54
blood
54
bodily fluid
42
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
169
AMP
Genome assembly (visualization)
169
GRCh38
134
hg19
Lab
169
AMP-T2D consortium
biosample_type!
primary cell
files.file_type!
bed bed3
organ_slims!
bone element
BIOSAMPLE
ASSAY
169 results
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ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
cell line
smooth muscle cell of the coronary artery
4
52
8
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