Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
197
ChIP-seq
Assay category
197
DNA binding
Target of assay
423
histone modification
422
histone
407
transcription factor
224
broad histone mark
197
narrow histone mark
88
RNA binding protein
88
recombinant protein
29
chromatin remodeller
9
control
4
other context
4
other post-translational modification
Date released
37
October, 2019
28
August, 2017
22
April, 2019
22
May, 2019
19
May, 2020
15
December, 2017
15
May, 2024
11
October, 2018
8
February, 2018
7
August, 2021
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
1
November, 2017
Available data
204
bigWig
202
bed narrowPeak
189
bam
92
bigBed narrowPeak
67
fastq
42
tagAlign
11
bed bed3+
bed broadPeak
5
bigBed broadPeak
Organism
197
Homo sapiens
Biosample type
145
tissue
primary cell
40
in vitro differentiated cells
11
cell line
1
stem cell
Organ
brain
37
heart
34
liver
34
pancreas
18
blood vessel
18
vasculature
14
epithelium
13
connective tissue
13
limb
10
kidney
8
nerve
7
embryo
6
artery
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
musculature of body
1
pituitary gland
Project
193
AMP
4
T1D
Genome assembly (visualization)
197
GRCh38
194
hg19
Lab
182
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
8
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
6
inconsistent control read length
biosample_type!
primary cell
files.file_type!
bed broadPeak
organ_slims!
brain
BIOSAMPLE
ASSAY
197 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
26
left cardiac atrium
15
islet of Langerhans
10
kidney
10
heart left ventricle
8
+ See 30 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
+ See 7 more…
cell line
EndoC_BH1
6
Panc1
3
GM12878
1
HepG2
1
stem cell
hESC
1
See all biosamples
Download