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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
290
ChIP-seq
Assay category
290
DNA binding
Target of assay
596
histone modification
595
histone
438
transcription factor
304
narrow histone mark
290
broad histone mark
90
RNA binding protein
88
recombinant protein
33
chromatin remodeller
9
control
5
other context
5
other post-translational modification
Date released
56
May, 2019
45
November, 2017
42
October, 2019
37
April, 2019
33
August, 2017
20
May, 2024
19
October, 2018
15
December, 2017
8
February, 2018
6
August, 2021
November, 2019
5
October, 2017
4
January, 2019
Available data
289
bed narrowPeak
289
bigWig
270
bam
221
bigBed narrowPeak
83
fastq
51
tagAlign
15
bed broadPeak
11
bed bed3+
7
bigBed broadPeak
Organism
286
Homo sapiens
Biosample type
242
tissue
primary cell
37
in vitro differentiated cells
10
cell line
1
stem cell
Organ
61
brain
57
heart
36
blood vessel
36
pancreas
36
vasculature
34
limb
27
liver
16
nerve
14
artery
12
connective tissue
10
kidney
7
epithelium
4
embryo
4
musculature of body
4
spleen
Project
290
AMP
Genome assembly (visualization)
290
GRCh38
247
hg19
Lab
270
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
3
missing controlled_by
Audit category:
14
inconsistent control read length
1
inconsistent assembly
biosample_type!
primary cell
files.file_type!
cool
month_released!
November, 2019
BIOSAMPLE
ASSAY
290 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
body of pancreas
11
+ See 24 more…
in vitro differentiated cells
adipocyte
12
hepatocyte
7
neural progenitor cell
6
pancreatic endoderm
4
definitive endodermal cell
2
+ See 5 more…
cell line
HepG2
7
Panc1
3
stem cell
hESC
1
See all biosamples
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