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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
191
ChIP-seq
Assay category
191
DNA binding
Target of assay
415
histone modification
414
histone
400
transcription factor
223
broad histone mark
191
narrow histone mark
88
recombinant protein
82
RNA binding protein
31
chromatin remodeller
8
control
5
other context
5
other post-translational modification
Date released
37
October, 2019
22
April, 2019
22
May, 2019
19
May, 2020
17
August, 2017
15
December, 2017
15
May, 2024
11
October, 2018
8
February, 2018
7
August, 2021
6
November, 2017
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
Available data
191
bigWig
189
bed narrowPeak
176
bam
91
bigBed narrowPeak
54
fastq
42
tagAlign
11
bed bed3+
7
bed broadPeak
5
bigBed broadPeak
Organism
189
Homo sapiens
Biosample type
146
tissue
primary cell
28
in vitro differentiated cells
16
cell line
1
stem cell
Organ
brain
39
liver
37
heart
36
pancreas
18
blood vessel
18
vasculature
14
epithelium
connective tissue
13
limb
10
kidney
8
nerve
7
embryo
6
artery
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
musculature of body
1
pituitary gland
Project
187
AMP
4
T1D
Genome assembly (visualization)
196
hg19
191
GRCh38
Lab
176
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
8
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
10
inconsistent control read length
biosample_type!
primary cell
organ_slims!
brain
connective tissue
BIOSAMPLE
ASSAY
191 results
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Clear Filters
ChIP-seq
tissue
liver
26
left cardiac atrium
15
islet of Langerhans
10
kidney
10
heart left ventricle
8
+ See 29 more…
in vitro differentiated cells
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
definitive endodermal cell
2
+ See 6 more…
cell line
EndoC_BH1
6
HepG2
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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