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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
DNase-seq
3
single cell RNA-seq
Assay category
6
DNA binding
5
DNA accessibility
3
Transcription
Target of assay
3
RNA binding protein
3
control
3
histone
3
histone modification
3
narrow histone mark
3
transcription factor
Date released
6
November, 2017
5
June, 2019
3
July, 2019
Available data
14
bam
14
bigWig
11
bed broadPeak
11
bed narrowPeak
11
bigBed broadPeak
11
bigBed narrowPeak
6
fastq
5
bed bed3+
3
tsv
Organism
14
Homo sapiens
Biosample type
tissue
14
primary cell
Organ
294
epithelium
293
liver
249
pancreas
86
connective tissue
86
vasculature
82
blood vessel
75
heart
66
artery
54
blood
54
bodily fluid
40
kidney
29
embryo
14
brain
12
vein
11
musculature of body
3
eye
2
adipose tissue
1
pericardium
0
spleen
Project
14
AMP
Genome assembly (visualization)
21
hg19
14
GRCh38
Lab
14
AMP-T2D consortium
biosample_type!
tissue
lab.title!
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
DNase-seq
single cell RNA-seq
primary cell
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
cerebellar granule cell
2
Purkinje cell
1
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