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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
44
DNA binding
2
DNA accessibility
Target of assay
32
transcription factor
12
histone
12
histone modification
7
broad histone mark
5
narrow histone mark
4
chromatin remodeller
3
RNA binding protein
1
other context
1
other post-translational modification
Date released
44
November, 2017
1
February, 2021
1
October, 2019
Available data
463
bam
454
bigWig
358
bed narrowPeak
323
bigBed narrowPeak
321
fastq
104
tsv
45
bed broadPeak
45
bigBed broadPeak
14
tagAlign
2
bed bed3+
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
1
hdf5
Organism
46
Homo sapiens
Biosample type
176
tissue
46
cell line
46
primary cell
1
in vitro differentiated cells
Organ
45
liver
1
pancreas
Project
46
AMP
Genome assembly (visualization)
60
hg19
46
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
1
inconsistent replicate
Audit category:
11
inconsistent control read length
month_released!
December, 2019
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
ATAC-seq
DNase-seq
cell line
HepG2
44
1
Panc1
1
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