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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ChIP-seq
Assay category
31
DNA binding
Target of assay
309
transcription factor
88
recombinant protein
58
RNA binding protein
31
histone
31
histone modification
28
chromatin remodeller
16
broad histone mark
15
narrow histone mark
2
other context
2
other post-translational modification
Date released
13
November, 2017
10
November, 2019
6
October, 2019
1
January, 2019
1
March, 2020
May, 2021
Available data
31
bam
31
bed narrowPeak
31
bigWig
20
bigBed narrowPeak
14
fastq
12
bed broadPeak
12
bigBed broadPeak
9
tagAlign
Organism
31
Homo sapiens
Biosample type
494
tissue
114
primary cell
77
in vitro differentiated cells
31
cell line
2
stem cell
Organ
17
pancreas
13
liver
11
epithelium
1
blood
1
bodily fluid
Project
30
AMP
1
T1D
Genome assembly (visualization)
36
hg19
31
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
month_released!
May, 2021
BIOSAMPLE
ASSAY
31 results
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ChIP-seq
cell line
HepG2
13
EndoC_BH1
11
Panc1
6
GM12878
1
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