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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
309
transcription factor
88
recombinant protein
58
RNA binding protein
32
histone
32
histone modification
28
chromatin remodeller
16
broad histone mark
16
narrow histone mark
2
other context
2
other post-translational modification
Date released
13
November, 2017
10
November, 2019
6
October, 2019
1
January, 2019
1
March, 2020
1
May, 2021
Available data
32
bam
32
bed narrowPeak
32
bigWig
20
bigBed narrowPeak
14
fastq
12
bed broadPeak
12
bigBed broadPeak
9
tagAlign
Organism
32
Homo sapiens
Biosample type
494
tissue
198
primary cell
67
in vitro differentiated cells
32
cell line
2
stem cell
Organ
18
pancreas
13
liver
12
epithelium
1
blood
1
bodily fluid
Project
30
AMP
2
T1D
Genome assembly (visualization)
37
hg19
32
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
12
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
9
inconsistent control read length
organ_slims!
embryo
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
cell line
HepG2
13
EndoC_BH1
12
Panc1
6
GM12878
1
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