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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
total RNA-seq
20
ChIP-seq
1
ATAC-seq
1
DNase-seq
Assay category
37
Transcription
20
DNA binding
2
DNA accessibility
Target of assay
12
histone
12
histone modification
8
transcription factor
7
recombinant protein
6
broad histone mark
6
narrow histone mark
1
RNA binding protein
Date released
26
February, 2021
13
November, 2019
12
October, 2019
5
May, 2021
3
March, 2020
Available data
59
bam
58
bigWig
37
tsv
22
bed narrowPeak
1
bigBed narrowPeak
Organism
59
Homo sapiens
Biosample type
213
primary cell
165
tissue
59
cell line
20
in vitro differentiated cells
Organ
268
liver
64
artery
64
blood vessel
64
heart
64
vasculature
55
pancreas
54
blood
54
bodily fluid
49
epithelium
12
kidney
8
embryo
Project
55
AMP
4
T1D
Genome assembly (visualization)
62
hg19
59
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
57
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
59 results
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total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
cell line
EndoC_BH1
33
13
1
RCC 7860 HIF1a re-expression
1
3
RCC 7860 HIF2a over-expression
1
2
RCC 7860 vector
1
2
glomerular visceral epithelial cell
1
1
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