Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
44
ChIP-seq
23
DNase-seq
22
ATAC-seq
Assay category
45
DNA accessibility
44
DNA binding
Target of assay
36
histone
36
histone modification
20
narrow histone mark
16
broad histone mark
8
RNA binding protein
8
transcription factor
1
chromatin remodeller
Date released
45
June, 2019
16
August, 2017
14
September, 2018
5
September, 2017
4
May, 2019
4
November, 2017
1
November, 2020
Available data
507
bam
501
bigWig
250
tsv
245
bed narrowPeak
227
fastq
98
tagAlign
89
bigBed narrowPeak
39
bed broadPeak
39
bigBed broadPeak
26
bed bed3+
1
bed bed3
1
hic
Organism
89
Homo sapiens
Biosample type
493
tissue
323
cell line
89
primary cell
15
in vitro differentiated cells
Organ
60
epithelium
22
pancreas
20
vasculature
blood vessel
16
kidney
15
connective tissue
12
vein
11
brain
9
musculature of body
6
heart
3
eye
2
liver
Project
89
AMP
Genome assembly (visualization)
89
GRCh38
86
hg19
Lab
89
AMP-T2D consortium
Audit category:
23
inconsistent ontology term
Audit category:
2
inconsistent assembly
1
inconsistent control read length
1
inconsistent control run_type
organ_slims!
blood vessel
skeleton
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
ATAC-seq
primary cell
skeletal muscle myoblast
13
pancreatic beta cell
7
skeletal muscle satellite cell
7
cardiac fibroblast
3
3
mesenchymal stem cell
6
+ See 21 more…
See all biosamples
Download