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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
total RNA-seq
3
DNase-seq
1
ChIP-seq
Assay category
4
Transcription
3
DNA accessibility
1
DNA binding
Target of assay
2
histone
2
histone modification
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
4
July, 2019
4
June, 2019
Available data
8
bam
8
bigWig
4
bed narrowPeak
4
bigBed narrowPeak
4
tsv
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
Organism
8
Homo sapiens
Biosample type
154
tissue
64
cell line
8
primary cell
1
in vitro differentiated cells
Organ
186
epithelium
161
pancreas
28
connective tissue
23
kidney
15
vasculature
12
blood vessel
11
brain
8
heart
7
musculature of body
7
vein
4
liver
2
adipose tissue
2
artery
2
eye
1
pericardium
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
month_released!
December, 2019
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
8 results
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total RNA-seq
DNase-seq
ChIP-seq
primary cell
cardiac fibroblast
3
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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