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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
single cell RNA-seq
32
ChIP-seq
26
total RNA-seq
14
ATAC-seq
Assay category
69
Transcription
32
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
149
May, 2021
72
September, 2018
48
July, 2018
47
June, 2019
45
May, 2020
43
April, 2018
42
August, 2017
22
October, 2019
July, 2019
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
August, 2021
3
June, 2018
3
September, 2020
2
February, 2021
2
October, 2018
1
March, 2023
Available data
115
bam
115
bigWig
110
fastq
69
tsv
46
bed narrowPeak
14
bigBed narrowPeak
Organism
115
Homo sapiens
Biosample type
115
primary cell
6
tissue
Organ
105
pancreas
94
epithelium
2
connective tissue
Project
115
AMP
Genome assembly (visualization)
115
GRCh38
115
hg19
Lab
115
AMP-T2D consortium
Audit category:
32
missing controlled_by
month_released!
July, 2019
BIOSAMPLE
ASSAY
115 results
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single cell RNA-seq
ChIP-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic ductal cell
6
13
4
4
pancreatic acinar cell
6
8
2
3
pancreatic beta cell
3
10
4
pancreatic alpha cell
3
10
3
pancreatic endocrine cell
11
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