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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
863
target gene predictions
617
accessible chromatin
164
chromatin state
88
histone modifications
38
candidate regulatory elements
35
eQTL
9
gene expression
6
binding sites
6
caQTL
Date released
1069
July, 2026
333
November, 2021
161
September, 2022
97
May, 2021
38
May, 2024
36
January, 2022
31
February, 2024
23
January, 2020
12
July, 2025
7
October, 2019
6
May, 2022
4
February, 2023
3
August, 2021
2
November, 2020
2
October, 2022
1
February, 2021
1
May, 2020
Available data
1641
bed bed3+
280
bigWig
164
bed bed9
12
bed bed3
12
bed narrowPeak
9
tsv
4
bigBed bed9
Organism
1826
Homo sapiens
Collection Tags
543
ENCODE-rE2G
393
HDMA
354
AMP
345
T2DKP
160
EpiMap
135
T1D
133
CATlas
97
BLUEPRINT
35
T2D
35
eQTLCatalogue
34
DGA
26
FNIH_projects-heart
12
FNIH_projects-liver
6
4DN
6
ENCODE
4
CMDGA
Biosample type
1826
primary cell
1398
tissue
572
cell line
109
in vitro differentiated cells
Organ
457
blood
219
epithelium
190
brain
98
skin of body
91
connective tissue
78
liver
76
heart
57
lung
53
eye
47
vasculature
46
muscle organ
36
thymus
35
blood vessel
28
kidney
24
adrenal gland
24
spleen
23
pancreas
22
thyroid gland
19
intestine
19
musculature of body
17
mammary gland
14
extraembryonic component
9
stomach
6
embryo
6
esophagus
6
large intestine
6
penis
5
lymphatic vessel
5
vein
4
artery
4
bone element
4
bronchus
4
placenta
4
small intestine
3
gonad
3
prostate gland
3
skeleton
2
bone marrow
2
ovary
2
uterus
1
mouth
1
spinal cord
1
testis
Project
1490
AMP
333
ENCODE
3
T1D
Genome assembly (visualization)
1841
hg19
1826
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
1826 results
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Clear Filters
target gene predictions
accessible chromatin
chromatin state
histone modifications
candidate regulatory elements
eQTL
gene expression
binding sites
caQTL
primary cell
monocyte
13
84
3
fibroblast
28
40
3
2
T-cell
62
stimulated activated CD4-positive, alpha-beta T cell
55
CD4-positive, alpha-beta T cell
50
1
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