Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
294
accessible chromatin
164
chromatin state
117
target gene predictions
88
histone modifications
38
candidate regulatory elements
35
eQTL
9
gene expression
6
binding sites
6
caQTL
Date released
333
November, 2021
161
September, 2022
97
May, 2021
38
May, 2024
36
January, 2022
31
February, 2024
23
January, 2020
12
July, 2025
7
October, 2019
6
May, 2022
4
February, 2023
3
August, 2021
2
November, 2020
2
October, 2022
1
February, 2021
1
May, 2020
Available data
572
bed bed3+
280
bigWig
164
bed bed9
12
bed bed3
12
bed narrowPeak
9
tsv
4
bigBed bed9
Organism
757
Homo sapiens
Collection Tags
354
AMP
345
T2DKP
160
EpiMap
135
T1D
97
BLUEPRINT
35
T2D
35
eQTLCatalogue
34
DGA
26
FNIH_projects-heart
12
FNIH_projects-liver
6
4DN
6
ENCODE
4
CMDGA
Biosample type
757
primary cell
734
tissue
365
cell line
65
in vitro differentiated cells
Organ
228
epithelium
99
connective tissue
50
vasculature
38
liver
34
blood vessel
27
skin of body
23
pancreas
19
intestine
19
kidney
19
musculature of body
16
heart
13
lung
13
mammary gland
12
brain
11
extraembryonic component
10
adrenal gland
9
stomach
8
eye
8
lymphatic vessel
6
embryo
6
large intestine
6
penis
5
esophagus
5
vein
4
artery
4
bronchus
4
small intestine
3
gonad
3
placenta
2
bone element
2
bone marrow
2
ovary
2
prostate gland
2
thyroid gland
2
uterus
1
mouth
1
spinal cord
1
testis
1
thymus
Project
421
AMP
333
ENCODE
3
T1D
Genome assembly (visualization)
1841
hg19
757
GRCh38
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
757 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
target gene predictions
histone modifications
candidate regulatory elements
eQTL
gene expression
binding sites
caQTL
primary cell
monocyte
13
84
3
fibroblast
16
4
3
2
macrophage
11
1
3
7
1
endothelial cell
12
6
3
1
pericyte cell
9
1
9
2
+ See 204 more…
See all biosamples
Download