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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
68
DNA binding
4
Transcription
2
DNA accessibility
1
DNA methylation
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
36
May, 2019
29
October, 2019
5
July, 2019
4
November, 2017
1
March, 2020
Available data
84
bam
84
bigWig
79
bed narrowPeak
77
bigBed narrowPeak
13
bed broadPeak
13
bigBed broadPeak
bed bed3+
4
fastq
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
75
Homo sapiens
Biosample type
61
tissue
14
primary cell
Organ
606
pancreas
547
connective tissue
520
liver
418
adipose tissue
275
epithelium
heart
185
brain
180
vasculature
178
blood vessel
127
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
nerve
26
embryo
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
75
AMP
Genome assembly (visualization)
83
hg19
75
GRCh38
Lab
75
AMP-T2D consortium
files.file_type!
bed bed3+
organ_slims!
heart
BIOSAMPLE
ASSAY
75 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial artery
18
1
thoracic aorta
12
2
1
ascending aorta
13
1
aorta
11
1
1
primary cell
endothelial cell of umbilical vein
10
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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