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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
26
ChIP-seq
Assay category
54
Transcription
45
DNA accessibility
26
DNA binding
Target of assay
21
histone
21
histone modification
14
broad histone mark
7
narrow histone mark
5
transcription factor
1
RNA binding protein
Date released
64
February, 2021
35
February, 2023
20
October, 2019
3
July, 2019
3
May, 2019
Available data
94
bam
86
bigWig
75
bed narrowPeak
54
tsv
25
bigBed narrowPeak
5
tagAlign
4
bed bed3+
bed broadPeak
4
bigBed broadPeak
Organism
125
Homo sapiens
Biosample type
64
cell line
59
tissue
2
primary cell
Organ
621
pancreas
557
connective tissue
482
liver
422
adipose tissue
274
epithelium
236
heart
176
blood vessel
176
vasculature
171
brain
127
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
125
AMP
Genome assembly (visualization)
125
GRCh38
90
hg19
Lab
125
AMP-T2D consortium
files.file_type!
bed broadPeak
BIOSAMPLE
ASSAY
125 results
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total RNA-seq
ATAC-seq
ChIP-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
3
tibial artery
1
18
pituitary gland
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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