Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
74
chromatin state
36
Fine-mapped variants
30
eQTL
27
accessible chromatin
4
target gene predictions
Date released
74
September, 2022
36
March, 2020
19
January, 2022
18
January, 2020
12
February, 2020
10
November, 2021
2
May, 2020
Available data
80
bed bed9
48
tsv
31
bed bed3+
27
bigWig
bigBed bed9
Organism
170
Homo sapiens
Biosample type
137
tissue
22
primary cell
11
cell line
1
in vitro differentiated cells
Organ
242
epithelium
146
brain
129
connective tissue
103
kidney
93
musculature of body
85
heart
82
vasculature
80
embryo
80
lung
79
intestine
74
limb
66
blood vessel
62
liver
61
pancreas
58
uterus
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
26
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
skeleton
10
nerve
10
penis
8
lymph node
8
lymphatic vessel
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
mouth
4
bronchus
3
breast
3
vagina
3
vein
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
161
AMP
10
ENCODE
Genome assembly (visualization)
488
hg19
171
GRCh38
files.file_type!
bigBed bed9
BIOSAMPLE
TYPE
171 results
search-icon
table-tab-icon
Clear Filters
chromatin state
Fine-mapped variants
eQTL
accessible chromatin
target gene predictions
tissue
brain
16
2
1
adrenal gland
14
1
caudate nucleus
3
3
2
1
cerebellum
2
3
2
1
frontal cortex
2
3
2
1
+ See 24 more…
primary cell
cortical cell of adrenal gland
3
2
cardiac fibroblast
3
astrocyte of the cerebellum
1
1
astrocyte of the hippocampus
1
1
brain microvascular endothelial cell
1
1
+ See 5 more…
cell line
SK-N-DZ
2
SK-N-SH
2
A172
1
BE(2)-C
1
Daoy
1
+ See 4 more…
in vitro differentiated cells
hippocampal neuron
1
See all biosamples
Download