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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
232
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
253
Transcription
8
DNA methylation
6
DNA accessibility
Target of assay
3
control
Date released
563
February, 2021
232
August, 2017
226
November, 2017
210
June, 2019
188
May, 2020
187
May, 2021
167
October, 2019
164
July, 2018
96
May, 2019
89
August, 2021
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
12
May, 2023
8
October, 2017
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
286
bam
286
bigWig
253
tsv
24
bed narrowPeak
tagAlign
8
bed bedMethyl
8
bigBed bedMethyl
Organism
267
Homo sapiens
Biosample type
204
tissue
63
primary cell
Organ
150
liver
21
heart
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
6
kidney
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
222
AMP
45
T1D
Genome assembly (visualization)
324
hg19
267
GRCh38
Lab
222
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
267 results
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Clear Filters
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
liver
145
1
heart left ventricle
2
2
2
omental fat pad
4
1
subcutaneous adipose tissue
4
1
body of pancreas
2
2
+ See 20 more…
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 35 more…
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