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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
ChIP-seq
57
total RNA-seq
46
ATAC-seq
5
DNase-seq
1
WGBS
Assay category
61
DNA binding
57
Transcription
51
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
36
broad histone mark
18
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
64
February, 2021
39
May, 2019
35
February, 2023
21
October, 2019
7
July, 2019
3
June, 2019
1
March, 2020
Available data
135
bam
127
bigWig
112
bed narrowPeak
62
bigBed narrowPeak
57
tsv
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
4
tagAlign
1
bed bedMethyl
1
bigBed bedMethyl
Organism
170
Homo sapiens
Biosample type
105
tissue
64
cell line
1
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
epithelium
266
heart
216
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
170
AMP
Genome assembly (visualization)
170
GRCh38
135
hg19
Lab
170
AMP-T2D consortium
files.file_type!
tagAlign bed3+
organ_slims!
epithelium
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
170 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
WGBS
tissue
coronary artery
3
36
2
tibial artery
18
1
2
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
smooth muscle cell of the coronary artery
1
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