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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
135
ChIP-seq
4
ATAC-seq
2
DNase-seq
Assay category
135
DNA binding
6
DNA accessibility
Target of assay
102
histone modification
101
histone
51
narrow histone mark
49
broad histone mark
34
transcription factor
7
RNA binding protein
chromatin remodeller
2
control
Date released
267
November, 2017
209
June, 2019
191
October, 2019
141
August, 2017
103
May, 2021
96
May, 2019
90
August, 2021
74
December, 2017
71
November, 2018
64
April, 2019
46
September, 2018
40
May, 2024
40
October, 2018
36
November, 2019
35
February, 2023
28
December, 2018
23
February, 2021
19
May, 2020
16
February, 2018
15
January, 2019
14
July, 2019
13
October, 2017
11
May, 2023
7
August, 2020
7
September, 2017
3
March, 2020
3
September, 2020
2
March, 2019
2
November, 2020
1
March, 2023
Available data
230
bam
230
fastq
228
bigWig
113
bed narrowPeak
tsv
35
bigBed narrowPeak
29
bed bed3+
18
bed broadPeak
17
tagAlign
12
bigBed broadPeak
Organism
135
Homo sapiens
Biosample type
53
tissue
47
in vitro differentiated cells
41
primary cell
Organ
63
connective tissue
63
pancreas
19
liver
17
epithelium
adipose tissue
Project
141
AMP
Genome assembly (visualization)
169
hg19
141
GRCh38
Lab
141
AMP-T2D consortium
Audit category:
27
missing controlled_by
Audit category:
14
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
files.file_type!
tsv
organ_slims!
adipose tissue
target.investigated_as!
chromatin remodeller
BIOSAMPLE
ASSAY
141 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
21
1
liver
18
pancreas
12
right lobe of liver
1
in vitro differentiated cells
adipocyte
46
1
primary cell
pancreatic endocrine cell
12
skeletal muscle myoblast
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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