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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
3
DNase-seq
3
total RNA-seq
1
ATAC-seq
Assay category
8
DNA binding
4
DNA accessibility
3
Transcription
Target of assay
16
histone
16
histone modification
8
broad histone mark
narrow histone mark
Date released
50
September, 2018
33
April, 2018
33
July, 2018
26
February, 2021
16
June, 2019
15
October, 2019
9
August, 2017
9
December, 2017
9
November, 2019
7
August, 2020
7
May, 2021
5
December, 2019
5
July, 2019
5
September, 2017
3
August, 2018
3
May, 2019
3
September, 2020
2
March, 2020
2
November, 2017
2
October, 2018
1
August, 2021
1
June, 2018
Available data
15
bam
14
bigWig
12
bed narrowPeak
8
bigBed narrowPeak
3
tsv
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
15
Homo sapiens
Biosample type
13
primary cell
2
cell line
Organ
40
limb
24
blood vessel
24
vasculature
23
nerve
17
artery
17
kidney
15
epithelium
7
vein
5
heart
5
liver
5
pancreas
4
brain
Project
15
AMP
Genome assembly (visualization)
19
hg19
15
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
xls
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
15 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
primary cell
endothelial cell of umbilical vein
5
2
epithelial cell of proximal tubule
3
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
glomerular visceral epithelial cell
1
1
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