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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
total RNA-seq
8
ChIP-seq
Assay category
14
Transcription
8
DNA binding
Target of assay
11
histone
11
histone modification
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
8
August, 2021
7
February, 2018
5
December, 2017
2
May, 2021
Available data
22
bam
21
bigWig
14
tsv
12
fastq
7
bed narrowPeak
2
bed bed3+
Organism
22
Homo sapiens
Biosample type
14
in vitro differentiated cells
8
cell line
Organ
568
pancreas
549
connective tissue
490
liver
423
adipose tissue
246
epithelium
227
heart
166
vasculature
163
blood vessel
126
kidney
122
artery
110
brain
83
limb
66
bone element
53
blood
53
bodily fluid
48
musculature of body
23
nerve
22
embryo
18
ureter
14
spleen
8
skeleton
vein
5
eye
1
pericardium
Project
22
AMP
Genome assembly (visualization)
22
GRCh38
22
hg19
1
hg18
Lab
22
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
inconsistent control read length
files.file_type!
xls
organ_slims!
vein
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
22 results
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total RNA-seq
ChIP-seq
in vitro differentiated cells
pancreatic endoderm
4
8
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
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