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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
87
ChIP-seq
Assay category
87
DNA binding
Target of assay
87
histone
87
histone modification
47
narrow histone mark
40
broad histone mark
9
transcription factor
8
RNA binding protein
1
chromatin remodeller
Date released
21
September, 2018
16
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
March, 2020
Available data
87
bam
87
bed narrowPeak
87
bigWig
51
fastq
29
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
87
Homo sapiens
Biosample type
61
primary cell
15
in vitro differentiated cells
11
cell line
Organ
168
brain
133
pancreas
96
heart
87
epithelium
69
liver
66
vasculature
65
blood vessel
47
limb
34
connective tissue
30
kidney
24
nerve
20
artery
13
musculature of body
11
embryo
10
vein
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
86
AMP
1
T1D
Genome assembly (visualization)
89
hg19
87
GRCh38
Lab
87
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
Audit category:
21
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
zippedFastqFolder
month_released!
March, 2020
BIOSAMPLE
ASSAY
87 results
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Clear Filters
ChIP-seq
primary cell
pancreatic ductal cell
13
endothelial cell of umbilical vein
10
pancreatic acinar cell
8
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
+ See 6 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
11
See all biosamples
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