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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
6
ChIP-seq
Assay category
16
DNA accessibility
6
DNA binding
Target of assay
3
histone
3
histone modification
2
narrow histone mark
2
transcription factor
1
broad histone mark
1
control
Date released
9
June, 2019
4
October, 2019
3
August, 2017
3
August, 2021
3
November, 2018
Available data
687
bam
676
bigWig
499
bed narrowPeak
408
bigBed narrowPeak
347
fastq
220
tsv
64
bed broadPeak
64
bigBed broadPeak
35
tagAlign
22
bed bed3+
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
22
Homo sapiens
Biosample type
11
primary cell
11
tissue
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
29
pancreas
19
connective tissue
19
epithelium
18
ureter
11
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
22
AMP
Genome assembly (visualization)
24
hg19
22
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
22 results
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DNase-seq
ChIP-seq
primary cell
hepatocyte
1
3
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
hepatic stellate cell
1
+ See 2 more…
tissue
liver
2
3
coronary artery
2
tibial artery
2
ascending aorta
1
right lobe of liver
1
See all biosamples
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