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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
324
total RNA-seq
80
single cell RNA-seq
4
WGBS
2
small RNA-seq
Assay category
406
Transcription
4
DNA methylation
Date released
153
July, 2018
89
August, 2017
40
May, 2021
39
April, 2018
26
February, 2021
26
September, 2018
20
November, 2019
4
July, 2019
4
November, 2018
3
August, 2018
3
March, 2020
2
October, 2018
1
June, 2018
Available data
621
bam
611
bigWig
406
tsv
357
fastq
188
bed narrowPeak
89
bigBed narrowPeak
29
bed bed3+
14
bed broadPeak
8
tagAlign
7
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
1
hdf5
Organism
410
Homo sapiens
Biosample type
275
tissue
102
primary cell
33
cell line
Organ
476
connective tissue
410
pancreas
400
adipose tissue
163
liver
146
epithelium
76
heart
59
blood vessel
59
vasculature
58
bone element
54
artery
14
embryo
12
brain
12
kidney
7
musculature of body
5
limb
4
nerve
2
spleen
1
pericardium
0
urinary bladder
Project
408
AMP
2
T1D
Genome assembly (visualization)
410
GRCh38
410
hg19
Lab
410
AMP-T2D consortium
Audit category:
38
inconsistent ontology term
BIOSAMPLE
ASSAY
410 results
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total RNA-seq
single cell RNA-seq
WGBS
small RNA-seq
tissue
islet of Langerhans
260
6
body of pancreas
2
2
2
pancreas
1
2
primary cell
pancreatic alpha cell
10
12
pancreatic beta cell
10
12
pancreatic acinar cell
4
12
pancreatic ductal cell
4
10
pancreatic delta cell
11
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cell line
EndoC_BH1
33
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