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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
93
ChIP-seq
5
ATAC-seq
1
DNase-seq
Assay category
93
DNA binding
6
DNA accessibility
Target of assay
71
histone modification
70
histone
35
narrow histone mark
34
broad histone mark
22
transcription factor
5
RNA binding protein
2
chromatin remodeller
Date released
185
November, 2017
141
October, 2019
99
August, 2017
96
May, 2019
74
August, 2021
72
December, 2017
64
April, 2019
63
November, 2018
46
September, 2018
45
October, 2018
40
May, 2024
37
November, 2019
35
February, 2023
30
December, 2018
23
June, 2019
21
January, 2019
18
February, 2021
16
February, 2018
14
May, 2021
6
October, 2017
5
July, 2019
5
September, 2017
3
March, 2020
1
November, 2020
Available data
249
bam
249
fastq
247
bigWig
118
bed narrowPeak
89
tsv
38
bigBed narrowPeak
33
bed bed3+
bed broadPeak
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
99
Homo sapiens
Biosample type
42
in vitro differentiated cells
39
tissue
18
primary cell
Organ
44
connective tissue
36
pancreas
18
liver
17
epithelium
2
adipose tissue
Project
99
AMP
Genome assembly (visualization)
101
hg19
99
GRCh38
Lab
99
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
16
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
tagAlign
BIOSAMPLE
ASSAY
99 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
42
tissue
liver
17
islet of Langerhans
12
1
pancreas
6
adipose tissue
1
right lobe of liver
1
+ See 1 more…
primary cell
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
skeletal muscle myoblast
1
See all biosamples
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