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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
Assay category
29
DNA binding
Target of assay
29
histone
29
histone modification
15
narrow histone mark
14
broad histone mark
7
RNA binding protein
7
transcription factor
1
chromatin remodeller
Date released
12
December, 2017
10
October, 2019
3
May, 2019
2
June, 2019
2
November, 2017
Available data
88
bam
88
bed narrowPeak
88
bigWig
51
fastq
29
bigBed narrowPeak
4
tagAlign
3
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
Organism
29
Homo sapiens
Biosample type
17
primary cell
12
in vitro differentiated cells
Organ
91
brain
66
vasculature
65
blood vessel
56
heart
49
pancreas
47
limb
35
liver
29
epithelium
24
nerve
22
kidney
20
artery
13
musculature of body
10
vein
9
connective tissue
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
Project
29
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
Lab
29
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
files.file_type!
zippedFastqFolder
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
primary cell
endothelial cell of umbilical vein
10
kidney epithelial cell
3
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
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in vitro differentiated cells
hepatocyte
12
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