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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
7
DNase-seq
Assay category
59
DNA binding
7
DNA accessibility
Target of assay
55
histone
55
histone modification
36
broad histone mark
19
narrow histone mark
4
RNA binding protein
4
transcription factor
Date released
39
May, 2019
20
October, 2019
5
June, 2019
2
November, 2017
Available data
140
bam
132
bigWig
116
bed narrowPeak
66
bigBed narrowPeak
58
tsv
9
bed broadPeak
9
bigBed broadPeak
7
bed bed3+
4
tagAlign
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
62
tissue
4
primary cell
Organ
326
liver
126
brain
103
kidney
94
heart
89
pancreas
83
limb
82
vasculature
78
blood vessel
75
epithelium
54
blood
54
bodily fluid
46
musculature of body
26
nerve
25
artery
25
connective tissue
18
ureter
13
spleen
vein
9
adipose tissue
6
eye
Project
66
AMP
Genome assembly (visualization)
66
GRCh38
65
hg19
Lab
66
AMP-T2D consortium
lab.title!
Bing Ren, UCSD
organ_slims!
vein
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
DNase-seq
tissue
tibial artery
18
2
ascending aorta
13
1
thoracic aorta
12
aorta
11
coronary artery
3
2
primary cell
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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