Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
230
ChIP-seq
Assay category
230
DNA binding
Target of assay
221
histone
221
histone modification
126
narrow histone mark
95
broad histone mark
9
transcription factor
Date released
89
May, 2021
54
November, 2017
40
October, 2019
19
May, 2020
17
August, 2017
August, 2021
6
October, 2017
5
February, 2021
Available data
2912
bam
2893
bigWig
1536
bed narrowPeak
1385
tsv
992
bigBed narrowPeak
951
fastq
278
bed broadPeak
263
bigBed broadPeak
251
bed bed3+
230
tagAlign
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
1
tagAlign bed3+
Organism
224
Homo sapiens
Biosample type
116
tissue
95
primary cell
14
cell line
5
in vitro differentiated cells
Organ
82
brain
28
liver
8
pancreas
4
artery
4
blood vessel
4
heart
4
vasculature
2
epithelium
1
pituitary gland
Project
146
AMP
84
T1D
Genome assembly (visualization)
230
GRCh38
223
hg19
Lab
146
AMP-T2D consortium
84
Kyle Gaulton, UCSD
Audit category:
3
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
9
inconsistent control read length
2
inconsistent assembly
month_released!
August, 2021
organ_slims!
eye
BIOSAMPLE
ASSAY
230 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
liver
19
caudate nucleus
12
substantia nigra
12
layer of hippocampus
11
brain
6
+ See 40 more…
primary cell
monocyte
84
skeletal muscle myoblast
11
cell line
HepG2
9
smooth muscle cell of the coronary artery
4
iPSC derived cell line
1
in vitro differentiated cells
cardiomyocytes
3
pancreatic PP cell
2
See all biosamples
Download