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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1276total RNA-seq
  • 106single cell RNA-seq
  • 18small RNA-seq
Assay category
  • 1400Transcription
Target of assay
  • 3control
Date released
  • 545February, 2021
  • 188May, 2020
  • 173May, 2021
  • 164July, 2018
  • 89August, 2017
  • 65July, 2019
  • 49April, 2018
  • 26September, 2018
  • 20November, 2019
  • 16October, 2019
  • 15August, 2021
  • 15February, 2018
  • 13March, 2020
  • 5December, 2019
  • 5January, 2019
  • 4November, 2020
  • 3August, 2018
  • 3June, 2018
  • 2October, 2018
Available data
  • 2959bam
  • 2930bigWig
  • 1632bed narrowPeak
  • 1400tsv
  • 998bigBed narrowPeak
  • 951fastq
  • 282bed broadPeak
  • 267bigBed broadPeak
  • 258bed bed3+
  • 246tagAlign
  • 64xls
  • 17bed bedMethyl
  • 17bigBed bedMethyl
  • 2bed bed3
  • 1hdf5
  • 1hic
  • 1tagAlign bed3+
Organism
  • 1400Homo sapiens
Biosample type
  • 917tissue
  • 252primary cell
  • 127in vitro differentiated cells
  • 104cell line
Organ
  • 474connective tissue
  • 406pancreas
  • 398adipose tissue
  • 162liver
  • 146epithelium
  • 70heart
  • 58blood vessel
  • 58bone element
  • 58vasculature
  • 54artery
  • 14embryo
  • 12brain
  • 12kidney
  • 6musculature of body
  • 4limb
  • 4nerve
  • 1pericardium
Project
  • 1302AMP
  • 98T1D
Genome assembly (visualization)
  • 1402hg19
  • 1400GRCh38
Lab
  • 1304AMP-T2D consortium
  • 96Kyle Gaulton, UCSD
Audit category:
  • 134inconsistent ontology term
BIOSAMPLE
ASSAY

1400 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
tissue
adipose tissue381
islet of Langerhans2606
liver1471
bone tissue58
subcutaneous adipose tissue61
primary cell
monocyte53
pancreatic alpha cell1012
pancreatic beta cell1012
pancreatic acinar cell412
pancreatic ductal cell410
in vitro differentiated cells
cardiomyocytes59
cardiac precursors (cardiac muscle cell)19
induced pluripotent stem cell9
neural progenitor cell7
adipocyte4
cell line
smooth muscle cell of the coronary artery52
EndoC_BH133
H1-hESC8
HepG25
early embryonic cell2
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