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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 72ChIP-seq
  • 1DNase-seq
Assay category
  • 72DNA binding
  • 1DNA accessibility
Target of assay
  • 38histone
  • 38histone modification
  • 31transcription factor
  • 20narrow histone mark
  • 18broad histone mark
  • 11RNA binding protein
  • 3control
  • 1chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 43August, 2017
  • 27November, 2017
  • 2September, 2017
  • 1October, 2018
Available data
  • 73bam
  • 73fastq
  • 70bed narrowPeak
  • 70bigWig
  • 31bigBed narrowPeak
  • 12bed bed3+
  • 9bed broadPeak
  • 8bigBed broadPeak
  • 1tagAlign
Organism
  • 72Homo sapiens
Biosample type
  • 30in vitro differentiated cells
  • 23cell line
  • 15tissue
  • 5primary cell
Organ
  • 30connective tissue
  • 25liver
  • 13pancreas
  • 4brain
  • 2epithelium
  • 2vasculature
  • 1blood vessel
Project
  • 73AMP
Genome assembly (visualization)
  • 104hg19
  • 73GRCh38
Lab
  • 73AMP-T2D consortium
Audit category:
  • 1missing controlled_by
BIOSAMPLE
ASSAY

73 results

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ChIP-seq
DNase-seq
in vitro differentiated cells
adipocyte30
cell line
HepG223
tissue
islet of Langerhans101
liver2
pancreas2
primary cell
astrocyte of the cerebellum2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
skeletal muscle myoblast1
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