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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 88ChIP-seq
  • 9total RNA-seq
Assay category
  • 88DNA binding
  • 9Transcription
Target of assay
  • 45histone
  • 45histone modification
  • 43transcription factor
  • 23broad histone mark
  • 22narrow histone mark
  • 7RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 43November, 2017
  • 25August, 2017
  • 25February, 2018
  • 2December, 2017
  • 2November, 2018
Available data
  • 97bam
  • 97bigWig
  • 97fastq
  • 85bed narrowPeak
  • 55bigBed narrowPeak
  • 43bed broadPeak
  • 43bigBed broadPeak
  • 13tagAlign
  • 9tsv
  • 3bed bed3+
Organism
  • 97Homo sapiens
Biosample type
  • 45cell line
  • 25in vitro differentiated cells
  • 22primary cell
  • 5tissue
Organ
  • 47liver
  • 17pancreas
  • 14epithelium
  • 9embryo
Project
  • 97AMP
Genome assembly (visualization)
  • 117hg19
  • 97GRCh38
Lab
  • 97AMP-T2D consortium
Audit category:
  • 3missing controlled_by
Audit category:
  • 11inconsistent control read length
BIOSAMPLE
ASSAY

97 results

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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG245
in vitro differentiated cells
pancreatic endoderm63
endocrine cell22
definitive endodermal cell21
embryonic stem cell21
posterior foregut21
primary cell
skeletal muscle myoblast8
pancreatic alpha cell7
pancreatic beta cell7
tissue
islet of Langerhans3
liver2
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