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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 180ChIP-seq
  • 10DNase-seq
Assay category
  • 180DNA binding
  • 10DNA accessibility
Target of assay
  • 91histone
  • 91histone modification
  • 82transcription factor
  • 47broad histone mark
  • 44narrow histone mark
  • 19RNA binding protein
  • 15chromatin remodeller
  • 7control
  • 2other context
  • 2other post-translational modification
Date released
  • 82November, 2017
  • 47August, 2017
  • 23December, 2017
  • 16November, 2018
  • 14February, 2018
  • 6October, 2017
  • 2September, 2017
Available data
  • 190bam
  • 190fastq
  • 183bigWig
  • 182bed narrowPeak
  • 130bigBed narrowPeak
  • 81bed broadPeak
  • 72bigBed broadPeak
  • 37bed bed3+
  • 32tagAlign
Organism
  • 184Homo sapiens
Biosample type
  • 83cell line
  • 42tissue
  • 34in vitro differentiated cells
  • 29primary cell
  • 2stem cell
Organ
  • 90liver
  • 34pancreas
  • 16epithelium
  • 14brain
  • 13embryo
  • 4vasculature
  • 3connective tissue
  • 2adipose tissue
  • 2blood vessel
  • 1spleen
Project
  • 190AMP
Genome assembly (visualization)
  • 226hg19
  • 190GRCh38
Lab
  • 190AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 10missing controlled_by
Audit category:
  • 27inconsistent control read length
  • 7inconsistent control run_type
  • 3inconsistent assembly
BIOSAMPLE
ASSAY

190 results

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Clear Filters
ChIP-seq
DNase-seq
cell line
HepG283
tissue
islet of Langerhans14
brain62
pancreas8
liver42
body of pancreas2
in vitro differentiated cells
pancreatic endoderm11
primitive gut cell6
Posterior foregut4
definitive endodermal cell4
Hepatic endoderm2
primary cell
skeletal muscle myoblast13
pancreatic alpha cell5
pancreatic beta cell5
astrocyte of the cerebellum2
brain microvascular endothelial cell2
stem cell
hESC2
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