Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
3
DNase-seq
1
WGBS
Assay category
48
DNA binding
3
DNA accessibility
1
DNA methylation
Target of assay
48
transcription factor
19
RNA binding protein
15
recombinant protein
5
chromatin remodeller
Date released
217
November, 2017
162
May, 2020
52
November, 2018
50
December, 2017
19
August, 2017
7
July, 2019
7
October, 2019
5
December, 2019
5
January, 2019
3
August, 2021
2
June, 2019
1
February, 2021
1
March, 2020
Available data
52
bam
52
bigWig
52
fastq
51
bed narrowPeak
51
bigBed narrowPeak
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
52
Homo sapiens
Biosample type
45
cell line
7
tissue
Organ
52
liver
12
blood
12
bodily fluid
6
pancreas
6
spleen
2
brain
1
adipose tissue
1
connective tissue
Project
52
AMP
Genome assembly (visualization)
52
GRCh38
49
hg19
Lab
52
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
lab.title!
Katalin Susztak, Upenn
organ_slims!
adrenal gland
BIOSAMPLE
ASSAY
52 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
cell line
HepG2
44
1
tissue
liver
4
2
right lobe of liver
1
Download