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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
286
transcription factor
81
recombinant protein
70
histone modification
69
histone
51
RNA binding protein
41
narrow histone mark
28
broad histone mark
21
chromatin remodeller
2
other context
2
other post-translational modification
1
control
Date released
19
May, 2020
17
December, 2017
13
August, 2017
13
November, 2017
5
October, 2019
3
August, 2021
Available data
70
bam
70
bed narrowPeak
70
bigWig
43
fastq
35
bigBed narrowPeak
31
tagAlign
12
bed broadPeak
12
bigBed broadPeak
3
bed bed3+
Organism
70
Homo sapiens
Biosample type
42
tissue
13
cell line
12
in vitro differentiated cells
3
primary cell
Organ
168
brain
pancreas
88
epithelium
70
liver
66
vasculature
65
blood vessel
55
heart
47
limb
34
connective tissue
24
nerve
20
artery
13
musculature of body
12
kidney
11
embryo
10
vein
6
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
1
pituitary gland
Project
70
AMP
Genome assembly (visualization)
83
hg19
70
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
10
inconsistent control read length
month_released!
April, 2019
organ_slims!
pancreas
BIOSAMPLE
ASSAY
70 results
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Clear Filters
ChIP-seq
tissue
liver
37
right lobe of liver
5
cell line
HepG2
13
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
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