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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ChIP-seq
59
total RNA-seq
43
ATAC-seq
30
DNase-seq
Assay category
113
DNA binding
73
DNA accessibility
59
Transcription
Target of assay
96
histone
96
histone modification
57
broad histone mark
39
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
64
February, 2021
46
April, 2019
40
May, 2024
35
February, 2023
33
June, 2019
July, 2019
15
May, 2019
7
October, 2019
3
May, 2021
2
March, 2020
Available data
202
bigWig
186
bed narrowPeak
170
bam
94
bigBed narrowPeak
59
tsv
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
4
tagAlign
Organism
245
Homo sapiens
Biosample type
174
tissue
64
cell line
6
primary cell
1
in vitro differentiated cells
Organ
624
pancreas
550
connective tissue
524
liver
412
adipose tissue
282
epithelium
245
heart
205
brain
199
kidney
183
vasculature
179
blood vessel
125
artery
95
limb
66
bone element
54
blood
54
bodily fluid
48
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pituitary gland
0
large intestine
Project
245
AMP
Genome assembly (visualization)
245
GRCh38
171
hg19
Lab
205
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
month_released!
August, 2020
July, 2019
BIOSAMPLE
ASSAY
245 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
left cardiac atrium
40
1
coronary artery
3
35
2
heart
12
2
18
heart left ventricle
28
1
3
heart right ventricle
11
1
1
+ See 4 more…
cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
cardiac fibroblast
3
3
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
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