Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
18
accessible chromatin
14
chromatin state
9
gene expression
6
binding sites
4
histone modifications
3
Fine-mapped variants
2
eQTL
1
target gene predictions
Date released
24
February, 2024
18
September, 2022
5
November, 2021
August, 2021
3
March, 2020
2
January, 2020
1
February, 2020
1
February, 2021
1
January, 2022
1
November, 2019
1
September, 2018
Available data
29
bed bed3+
23
bigWig
14
bed bed9
13
tsv
Organism
57
Homo sapiens
Biosample type
33
primary cell
15
tissue
8
cell line
1
in vitro differentiated cells
Organ
231
epithelium
152
brain
122
connective tissue
kidney
96
musculature of body
93
heart
87
vasculature
80
embryo
80
lung
79
intestine
78
limb
74
blood vessel
61
pancreas
58
uterus
57
liver
53
bodily fluid
51
blood
47
skin of body
43
large intestine
37
extraembryonic component
33
stomach
28
artery
25
adrenal gland
24
small intestine
23
adipose tissue
23
bone element
20
mammary gland
19
placenta
16
eye
16
ureter
14
esophagus
14
prostate gland
13
gonad
13
spinal cord
12
thymus
11
nerve
11
skeleton
10
penis
lymph node
8
spleen
7
ovary
7
thyroid gland
6
lymphoid tissue
6
testis
5
lymphatic vessel
5
mouth
5
vein
4
bronchus
3
breast
3
vagina
2
bone marrow
2
tongue
2
urinary bladder
1
nose
1
pituitary gland
Project
52
AMP
5
ENCODE
Genome assembly (visualization)
116
hg19
57
GRCh38
month_released!
August, 2021
organ_slims!
kidney
lymph node
BIOSAMPLE
TYPE
57 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
Fine-mapped variants
eQTL
target gene predictions
primary cell
endothelial cell of hepatic sinusoid
6
4
6
hepatocyte
7
1
5
1
hepatic stellate cell
2
1
tissue
liver
2
7
1
right lobe of liver
1
3
1
cell line
HepG2
1
1
4
HuH-7
1
HuH-7.5
1
in vitro differentiated cells
hepatocyte
1
Download