Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
53
total RNA-seq
44
ATAC-seq
9
DNase-seq
Assay category
73
DNA binding
53
DNA accessibility
53
Transcription
Target of assay
65
histone
65
histone modification
41
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
Date released
64
February, 2021
39
May, 2019
35
February, 2023
33
October, 2019
July, 2019
5
June, 2019
2
November, 2017
1
March, 2020
Available data
144
bam
136
bigWig
126
bed narrowPeak
78
bigBed narrowPeak
53
tsv
11
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
4
tagAlign
2
fastq
Organism
179
Homo sapiens
Biosample type
99
tissue
64
cell line
16
primary cell
Organ
631
pancreas
550
connective tissue
524
liver
412
adipose tissue
289
epithelium
245
heart
205
brain
199
kidney
183
vasculature
179
blood vessel
125
artery
95
limb
66
bone element
54
blood
54
bodily fluid
48
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pituitary gland
0
esophagus
0
skin of body
Project
179
AMP
Genome assembly (visualization)
179
GRCh38
150
hg19
Lab
179
AMP-T2D consortium
month_released!
July, 2019
BIOSAMPLE
ASSAY
179 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
35
2
tibial artery
18
1
2
ascending aorta
13
1
aorta
11
1
thoracic aorta
12
cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
Download