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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
Assay category
11
DNA binding
Target of assay
724
histone modification
723
histone
380
narrow histone mark
342
broad histone mark
193
transcription factor
59
RNA binding protein
22
recombinant protein
12
control
11
chromatin remodeller
3
other context
3
other post-translational modification
Date released
November, 2017
5
November, 2018
3
August, 2017
3
December, 2017
Available data
11
bam
11
bed narrowPeak
11
bigWig
11
fastq
9
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
11
Homo sapiens
Biosample type
5
cell line
3
in vitro differentiated cells
2
tissue
1
primary cell
Organ
blood
10
bodily fluid
8
liver
2
connective tissue
1
epithelium
Project
11
AMP
Genome assembly (visualization)
11
GRCh38
11
hg19
Lab
11
AMP-T2D consortium
Audit category:
2
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
7
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2017
October, 2017
organ_slims!
blood
BIOSAMPLE
ASSAY
11 results
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ChIP-seq
cell line
HepG2
5
in vitro differentiated cells
adipocyte
2
hepatocyte
1
tissue
liver
2
primary cell
skeletal muscle myoblast
1
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