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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
39
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
64
DNA binding
60
Transcription
8
DNA methylation
6
DNA accessibility
Target of assay
59
histone
59
histone modification
37
broad histone mark
22
narrow histone mark
5
transcription factor
3
RNA binding protein
3
control
Date released
542
February, 2021
276
November, 2017
267
May, 2021
232
August, 2017
207
May, 2020
192
June, 2019
184
October, 2019
131
July, 2018
102
August, 2021
92
May, 2019
79
November, 2018
74
July, 2019
64
April, 2019
61
December, 2017
45
October, 2018
44
November, 2019
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
April, 2018
14
October, 2017
13
March, 2020
12
May, 2023
11
September, 2018
6
November, 2020
2
June, 2018
2
March, 2019
2
September, 2017
1
March, 2023
Available data
138
bam
138
bigWig
69
bed narrowPeak
64
bigBed narrowPeak
60
tsv
8
bed bedMethyl
8
bigBed bedMethyl
Organism
138
Homo sapiens
Biosample type
125
tissue
13
primary cell
Organ
67
heart
24
kidney
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
7
liver
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
138
AMP
Genome assembly (visualization)
143
hg19
138
GRCh38
Lab
138
AMP-T2D consortium
organ_slims!
epithelium
BIOSAMPLE
ASSAY
138 results
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ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
28
2
2
2
kidney
18
heart right ventricle
11
2
heart
7
2
1
1
omental fat pad
4
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 5 more…
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