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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
42
total RNA-seq
16
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
64
DNA binding
61
Transcription
8
DNA methylation
6
DNA accessibility
Target of assay
59
histone
59
histone modification
37
broad histone mark
22
narrow histone mark
5
transcription factor
3
RNA binding protein
3
control
Date released
542
February, 2021
280
November, 2017
233
May, 2021
207
May, 2020
206
June, 2019
199
October, 2019
105
August, 2021
97
August, 2017
95
May, 2019
77
December, 2017
75
July, 2019
73
November, 2018
64
April, 2019
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
12
May, 2023
11
July, 2018
10
April, 2018
10
March, 2020
9
October, 2017
6
November, 2019
6
November, 2020
5
December, 2019
5
October, 2018
2
June, 2018
1
March, 2023
Available data
139
bam
139
bigWig
69
bed narrowPeak
64
bigBed narrowPeak
61
tsv
8
bed bedMethyl
8
bigBed bedMethyl
Organism
139
Homo sapiens
Biosample type
121
tissue
18
primary cell
Organ
67
heart
24
kidney
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
7
liver
5
epithelium
5
musculature of body
pancreas
3
artery
1
limb
1
pericardium
Project
139
AMP
Genome assembly (visualization)
150
hg19
139
GRCh38
Lab
139
AMP-T2D consortium
organ_slims!
pancreas
BIOSAMPLE
ASSAY
139 results
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ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
28
2
2
2
kidney
18
heart right ventricle
11
2
heart
7
2
1
1
omental fat pad
4
1
+ See 20 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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