Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
20
total RNA-seq
11
ChIP-seq
3
single cell RNA-seq
Assay category
28
DNA accessibility
23
Transcription
11
DNA binding
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
77
December, 2017
72
September, 2018
67
November, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
16
March, 2020
14
October, 2017
12
May, 2023
11
January, 2019
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
December, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
60
bam
37
bed narrowPeak
34
bigWig
23
tsv
3
fastq
Organism
62
Homo sapiens
Biosample type
41
tissue
13
cell line
5
in vitro differentiated cells
3
primary cell
Organ
56
pancreas
16
epithelium
1
adipose tissue
1
connective tissue
Project
62
AMP
Genome assembly (visualization)
65
hg19
62
GRCh38
Lab
60
AMP-T2D consortium
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
Audit category:
19
inconsistent ontology term
organ_slims!
bodily fluid
BIOSAMPLE
ASSAY
62 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
islet of Langerhans
21
19
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
1
11
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
Download